MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Staphylococcus aureus
4_5BalbC4O2_S4
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 228
bases: 2,789,951 bps
CDS: 2,555
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,625
Total number of protein coding genes annotated/found:
2,555
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5052|JADGLS010000044.1
SEQF5052_00040
Genome Viewer
NA
AA
1338/446
20849-22186
hypothetical protein
SEQF5052|JADGLS010000044.1
SEQF5052_00047
Genome Viewer
NA
AA
270/90
29097-28828
hypothetical protein
SEQF5052|JADGLS010000044.1
SEQF5052_00048
Genome Viewer
NA
AA
396/132
29246-29641
hypothetical protein
SEQF5052|JADGLS010000044.1
SEQF5052_00049
Genome Viewer
NA
AA
486/162
29631-30116
hypothetical protein
SEQF5052|JADGLS010000044.1
SEQF5052_00050
Genome Viewer
NA
AA
783/261
31067-30285
hypothetical protein
SEQF5052|JADGLS010000044.1
SEQF5052_00051
Genome Viewer
NA
AA
1113/371
32176-31064
hypothetical protein
SEQF5052|JADGLS010000044.1
SEQF5052_00059
Genome Viewer
NA
AA
525/175
44702-45226
hypothetical protein
SEQF5052|JADGLS010000044.1
SEQF5052_00061
Genome Viewer
NA
AA
318/106
47082-47399
Nucleoid-associated protein
SEQF5052|JADGLS010000049.1
SEQF5052_00063
Genome Viewer
NA
AA
318/106
542-225
hypothetical protein
SEQF5052|JADGLS010000049.1
SEQF5052_00064
Genome Viewer
NA
AA
165/55
951-787
hypothetical protein
SEQF5052|JADGLS010000049.1
SEQF5052_00065
Genome Viewer
NA
AA
909/303
1084-1992
hypothetical protein
SEQF5052|JADGLS010000049.1
SEQF5052_00067
Genome Viewer
NA
AA
888/296
4342-3455
hypothetical protein
SEQF5052|JADGLS010000049.1
SEQF5052_00070
Genome Viewer
NA
AA
390/130
8691-8302
hypothetical protein
SEQF5052|JADGLS010000049.1
SEQF5052_00109
Genome Viewer
NA
AA
816/272
32360-33175
putative hydrolase
SEQF5052|JADGLS010000049.1
SEQF5052_00110
Genome Viewer
NA
AA
855/285
33386-34240
hypothetical protein
SEQF5052|JADGLS010000049.1
SEQF5052_00113
Genome Viewer
NA
AA
849/283
37622-38470
putative oxidoreductase/MSMEI_2347
SEQF5052|JADGLS010000049.1
SEQF5052_00114
Genome Viewer
NA
AA
204/68
38703-38906
hypothetical protein
SEQF5052|JADGLS010000049.1
SEQF5052_00124
Genome Viewer
NA
AA
870/290
47930-48799
hypothetical protein
SEQF5052|JADGLS010000049.1
SEQF5052_00126
Genome Viewer
NA
AA
1008/336
50317-51324
Zinc-type alcohol dehydrogenase-like protein
SEQF5052|JADGLS010000049.1
SEQF5052_00128
Genome Viewer
NA
AA
537/179
53369-53905
hypothetical protein
🡄
Items 21 - 40
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JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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